Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA |
| Enrichment Score (ES) | -0.7074764 |
| Normalized Enrichment Score (NES) | -1.8053623 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.09826095 |
| FWER p-Value | 0.246 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CYCS | 1422484_at 1445484_at | 133 | 2.683 | 0.0658 | No | ||
| 2 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 1414 | 0.882 | 0.0310 | No | ||
| 3 | CASP8 | 1424552_at | 4574 | 0.296 | -0.1053 | No | ||
| 4 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 7278 | 0.173 | -0.2241 | No | ||
| 5 | TNF | 1419607_at | 9891 | 0.091 | -0.3409 | No | ||
| 6 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 10713 | 0.067 | -0.3766 | No | ||
| 7 | NFKB1 | 1427705_a_at 1442949_at | 11951 | 0.032 | -0.4322 | No | ||
| 8 | CRADD | 1427505_a_at 1443430_at | 14362 | -0.049 | -0.5410 | No | ||
| 9 | FASLG | 1418803_a_at 1449235_at | 14461 | -0.054 | -0.5440 | No | ||
| 10 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 15400 | -0.096 | -0.5842 | No | ||
| 11 | BID | 1417045_at 1447873_x_at 1448560_at | 15945 | -0.125 | -0.6057 | No | ||
| 12 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 16138 | -0.137 | -0.6109 | No | ||
| 13 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 16324 | -0.150 | -0.6153 | No | ||
| 14 | RIPK1 | 1419508_at 1439273_at 1449485_at | 16494 | -0.162 | -0.6186 | No | ||
| 15 | DAXX | 1419026_at | 17030 | -0.210 | -0.6375 | No | ||
| 16 | CASP2 | 1448165_at | 18295 | -0.366 | -0.6854 | No | ||
| 17 | BAG4 | 1418707_at 1439024_at 1449186_at | 18335 | -0.371 | -0.6772 | No | ||
| 18 | CASP9 | 1426125_a_at 1437537_at 1457816_at | 18999 | -0.498 | -0.6941 | Yes | ||
| 19 | DFFB | 1421229_at 1437051_at | 19256 | -0.562 | -0.6907 | Yes | ||
| 20 | APAF1 | 1450223_at | 19368 | -0.588 | -0.6801 | Yes | ||
| 21 | RELA | 1419536_a_at | 19723 | -0.683 | -0.6779 | Yes | ||
| 22 | TRAF2 | 1451233_at | 19866 | -0.732 | -0.6648 | Yes | ||
| 23 | FADD | 1416888_at 1446499_at | 20011 | -0.786 | -0.6503 | Yes | ||
| 24 | MAP3K14 | 1422999_at 1434364_at | 20160 | -0.837 | -0.6346 | Yes | ||
| 25 | FAS | 1460251_at | 20551 | -1.016 | -0.6252 | Yes | ||
| 26 | BIRC3 | 1421392_a_at 1425223_at | 20998 | -1.351 | -0.6094 | Yes | ||
| 27 | CFLAR | 1424996_at 1425686_at 1425687_at 1439600_at 1449317_at | 21351 | -1.795 | -0.5774 | Yes | ||
| 28 | TRAF1 | 1423602_at 1445452_at | 21401 | -1.883 | -0.5291 | Yes | ||
| 29 | TNFRSF1A | 1417291_at | 21427 | -1.934 | -0.4785 | Yes | ||
| 30 | CASP7 | 1426062_a_at 1448659_at | 21726 | -2.838 | -0.4160 | Yes | ||
| 31 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 21755 | -2.971 | -0.3377 | Yes | ||
| 32 | DFFA | 1450885_at 1457564_at | 21857 | -3.653 | -0.2444 | Yes | ||
| 33 | CASP6 | 1415995_at 1458715_at | 21868 | -3.739 | -0.1447 | Yes | ||
| 34 | CD247 | 1420716_at 1426079_at 1426396_at 1428059_at 1428060_at 1438392_at 1452539_a_at | 21916 | -5.509 | 0.0008 | Yes |
